Gene Tooltips JS

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gene-tooltips

Interfaces ​

GeneRIF ​

Defined in: config.ts:21

Properties ​

pubmed ​

pubmed: number

Defined in: config.ts:22

text ​

text: string

Defined in: config.ts:23

GeneTooltipConfig ​

Defined in: config.ts:81

Properties ​

api ​

api: "mygene"

Defined in: config.ts:83

constrainToViewport ​

constrainToViewport: boolean

Defined in: config.ts:99

display ​

display: Partial<TooltipDisplayConfig>

Defined in: config.ts:88

domainCount ​

domainCount: number

Defined in: config.ts:93

generifCount ​

generifCount: number

Defined in: config.ts:96

ideogram ​

ideogram: Partial<IdeogramConfig>

Defined in: config.ts:89

pathwayCount ​

pathwayCount: number

Defined in: config.ts:92

pathwaySource ​

pathwaySource: "reactome" | "kegg" | "wikipathways"

Defined in: config.ts:91

prefetch ​

prefetch: "smart" | "all" | "none"

Defined in: config.ts:84

prefetchThreshold ​

prefetchThreshold: number

Defined in: config.ts:85

selector ​

selector: string

Defined in: config.ts:82

structureCount ​

structureCount: number

Defined in: config.ts:95

theme ​

theme: string

Defined in: config.ts:87

tippyOptions ​

tippyOptions: Partial<Props>

Defined in: config.ts:90

tooltipHeight? ​

optional tooltipHeight: number

Defined in: config.ts:98

tooltipWidth? ​

optional tooltipWidth: number

Defined in: config.ts:97

transcriptCount ​

transcriptCount: number

Defined in: config.ts:94

truncateSummary ​

truncateSummary: number

Defined in: config.ts:86

GenomicPosition ​

Defined in: config.ts:3

Properties ​

chr ​

chr: string

Defined in: config.ts:4

end ​

end: number

Defined in: config.ts:6

start ​

start: number

Defined in: config.ts:5

strand ​

strand: number

Defined in: config.ts:7

IdeogramConfig ​

Defined in: config.ts:73

Properties ​

enabled ​

enabled: boolean

Defined in: config.ts:74

height ​

height: number

Defined in: config.ts:76

showLabels ​

showLabels: boolean

Defined in: config.ts:77

width ​

width: number

Defined in: config.ts:75

MyGeneExon ​

Defined in: config.ts:102

Properties ​

cdsend ​

cdsend: number

Defined in: config.ts:103

cdsstart ​

cdsstart: number

Defined in: config.ts:104

chr ​

chr: string

Defined in: config.ts:105

end? ​

optional end: number

Defined in: config.ts:111

position? ​

optional position: [number, number][]

Defined in: config.ts:109

start? ​

optional start: number

Defined in: config.ts:110

strand ​

strand: number

Defined in: config.ts:106

txend ​

txend: number

Defined in: config.ts:107

txstart ​

txstart: number

Defined in: config.ts:108

MyGeneInfoResult ​

Defined in: config.ts:27

Properties ​

_id ​

_id: string

Defined in: config.ts:28

ensembl? ​

optional ensembl: object

Defined in: config.ts:42

gene ​

gene: string

protein? ​

optional protein: string | string[]

transcript? ​

optional transcript: string | string[]

exons? ​

optional exons: MyGeneExon[]

Defined in: config.ts:41

generif? ​

optional generif: GeneRIF | GeneRIF[]

Defined in: config.ts:51

genomic_pos? ​

optional genomic_pos: GenomicPosition | GenomicPosition[]

Defined in: config.ts:34

interpro? ​

optional interpro: MyGeneInterproDomain | MyGeneInterproDomain[]

Defined in: config.ts:40

name ​

name: string

Defined in: config.ts:31

pathway? ​

optional pathway: object

Defined in: config.ts:35

kegg? ​

optional kegg: MyGenePathway | MyGenePathway[]

reactome? ​

optional reactome: MyGenePathway | MyGenePathway[]

wikipathways? ​

optional wikipathways: MyGenePathway | MyGenePathway[]

pdb? ​

optional pdb: string | string[]

Defined in: config.ts:47

query ​

query: string

Defined in: config.ts:29

summary? ​

optional summary: string

Defined in: config.ts:32

symbol ​

symbol: string

Defined in: config.ts:30

taxid ​

taxid: number

Defined in: config.ts:33

wikipedia? ​

optional wikipedia: object

Defined in: config.ts:48

url_stub? ​

optional url_stub: string

MyGeneInterproDomain ​

Defined in: config.ts:15

Properties ​

desc ​

desc: string

Defined in: config.ts:16

id ​

id: string

Defined in: config.ts:17

short_desc ​

short_desc: string

Defined in: config.ts:18

MyGenePathway ​

Defined in: config.ts:10

Properties ​

id ​

id: string

Defined in: config.ts:12

name ​

name: string

Defined in: config.ts:11

TooltipDisplayConfig ​

Defined in: config.ts:55

Properties ​

domains ​

domains: boolean

Defined in: config.ts:60

generifs ​

generifs: boolean

Defined in: config.ts:64

geneTrack ​

geneTrack: boolean

Defined in: config.ts:61

ideogram ​

ideogram: boolean

Defined in: config.ts:58

links: object

Defined in: config.ts:65

ensembl? ​

optional ensembl: boolean

ncbi? ​

optional ncbi: boolean

wikipedia? ​

optional wikipedia: boolean

location ​

location: boolean

Defined in: config.ts:57

pathways ​

pathways: boolean

Defined in: config.ts:59

species ​

species: boolean

Defined in: config.ts:56

structures ​

structures: boolean

Defined in: config.ts:63

transcripts ​

transcripts: boolean

Defined in: config.ts:62

Variables ​

defaultConfig ​

const defaultConfig: GeneTooltipConfig

Defined in: config.ts:114